This article "People with some cancers live longer after a COVID vaccine" is published in Nature.
Author: Max Kozlov
Journal: Nature
Year: 2025
Podcast type: Short
The authors are:
Affiliations:
Max Kozlov, Nature, London, UK
This article "Cryo-EM reveals open and closed Asgard chromatin assemblies" is published in Molecular Cell.
Author: Harsh M. Ranawat
Journal: Molecular Cell
Year: 2025
Podcast type: Short
The authors are:
Affiliations:
Harsh M. Ranawat, Svetlana O. Dodonova, Molecular Systems Biology Unit, European Molecular Biology Laboratory (EMBL), Meyerhofstrasse 1, 69117 Heidelberg, Germany
Harsh M. Ranawat, Collaboration for joint PhD degree between EMBL and Heidelberg University, Faculty of Biosciences, 69120 Heidelberg, Germany
Marc K. Cajili, Remus T. Dame, Leiden Institute of Chemistry, Leiden University, Einsteinweg 55, 2333 CC Leiden, the Netherlands
Natalia Lopez-Barbosa, Thomas Quail, Cell Biology and Biophysics Unit, EMBL, Meyerhofstrasse 1, 69117 Heidelberg, Germany
This article "Cell Decoder: decoding cell identity with multi-scale explainable deep learning" is published in Genome Biology.
Author: Jun Zhu
Journal: Genome Biology
Year: 2025
Podcast type: Methodology
The authors are:
Affiliations:
Jun Zhu, Yujia Xiang, State Key Laboratory of Medical Proteomics, Beijing Proteome Research Center, National Center for Protein Sciences (Beijing), Research Unit of Proteomics-driven Cancer Precision Medicine (Chinese Academy of Medical Sciences), Beijing, China
Jun Zhu, Yujia Xiang, School of Life Sciences, Tsinghua University, Beijing, China
Zeyang Zhang, Wenwu Zhu, Ziwei Zhang, Department of Computer Science and Technology, Tsinghua University, Beijing, China
Beini Xie, Tsinghua-Berkeley Shenzhen Institute, Tsinghua University, Shenzhen, China
Xinwen Dong, Rongyan Yao, Xiaowen Wang, Yang Li, Fuchu He, Cheng Chang, State Key Laboratory of Medical Proteomics, Beijing Proteome Research Center, National Center for Protein Sciences (Beijing), Research Unit of Proteomics-driven Cancer Precision Medicine (Chinese Academy of Medical Sciences), Beijing, China
Linhai Xie, Fuchu He, International Academy of Phronesis Medicine (Guang Dong), Guangzhou International Bio Island, Guangzhou, China
Peijie Zhou, Center for Machine Learning Research, Peking University, Beijing, China
Peijie Zhou, AI for Science Institute, Beijing, China
This article "Multidrug-resistant Gram-negative bacterial infections" is published in The Lancet.
Author: Nenad Macesic
Journal: The Lancet
Year: 2025
Podcast type: Review
The authors are:
Affiliations:
Nenad Macesic, Anton Y. Peleg, Department of Infectious Diseases, The Alfred Hospital and School of Translational Medicine, Monash University, Melbourne, VIC, Australia
Nenad Macesic, Anton Y. Peleg, Centre to Impact AMR, Monash University, Melbourne, VIC, Australia
Anton Y. Peleg, Infection Program, Monash Biomedicine Discovery Institute, Monash University, Melbourne, VIC, Australia
Anne-Catrin Uhlemann, Department of Medicine, Division of Infectious Diseases, Columbia University Irving Medical Center, New York, NY, USA
This article "Optimizing antimicrobial susceptibility testing: cost and environmental benefits of MIC volume reduction" is published in Antimicrobial Agents and Chemotherapy.
Author: Jonathan Clarhaut
Journal: Antimicrobial Agents and Chemotherapy
Year: 2025
Podcast type: Short
The authors are:
⦁ Jonathan Clarhaut
⦁ Jeremy Moreau
⦁ Tom Collet
⦁ Emma Babiard
⦁ Vincent Aranzana-Climent
⦁ Sandrine Marchand
⦁ Kevin Brunet
⦁ Julien M. Buyck
Affiliations:
Jonathan Clarhaut, Jeremy Moreau, Tom Collet, Emma Babiard, Vincent Aranzana-Climent, Sandrine Marchand, Kevin Brunet, Julien M. Buyck, Université de Poitiers, PHAR2, Inserm U1070, Poitiers, France
Jonathan Clarhaut, Sandrine Marchand, Laboratoire de Toxicologie et de Pharmacocinétique, CHU de Poitiers, Poitiers, France
Kevin Brunet, Service de Parasitologie et Mycologie Médicale, CHU de Poitiers, Poitiers, France
This article "The Microbiome Connection: A Common Pathway Linking Cancer and Heart Failure" is published in Biomedicines.
Author: Ioannis Paraskevaidis
Journal: Biomedicines
Year: 2025
Podcast type: Short
The authors are:
⦁ Ioannis Paraskevaidis
⦁ Elias Tsougos
⦁ Christos Kourek
Affiliations:
Ioannis Paraskevaidis, Christos Kourek, Medical School of Athens, National and Kapodistrian University of Athens, Athens, Greece
Elias Tsougos, Department of Cardiology, Hygeia Hospital, Athens, Greece
This article "GraphComm predicts cell–cell communication using a graph-based deep learning method in single-cell RNA sequencing data" is published in Nature Communications.
Author: Emily So
Journal: Nature Communications
Year: 2025
Podcast type: Short
The authors are:
Affiliations:
Emily So, Sisira Kadambat Nair, Benjamin Haibe-Kains, Princess Margaret Cancer Centre, University Health Network, Toronto, Ontario, Canada
Emily So, Benjamin Haibe-Kains, Department of Medical Biophysics, University of Toronto, Toronto, Ontario, Canada
Sikander Hayat, European Molecular Biology Laboratory (EMBL), Heidelberg, Germany
Bo Wang, Benjamin Haibe-Kains, Department of Computer Science, University of Toronto, Toronto, Ontario, Canada
Bo Wang, Vector Institute for Artificial Intelligence, Toronto, Ontario, Canada
Bo Wang, University Health Network, Toronto, Ontario, Canada
Benjamin Haibe-Kains, Ontario Institute for Cancer Research, Toronto, Ontario, Canada
This article "Deep learning speeds the search for new antibiotic scaffolds" is published in Nature Biotechnology.
Author: Yumeng Zhang
Journal: Nature Biotechnology
Year: 2025
Podcast type: Short
The authors are:
⦁ Yumeng Zhang
⦁ Jiangning Song
⦁ Cesar de la Fuente-Nunez
Affiliations:
Yumeng Zhang, Jiangning Song, Biomedicine Discovery Institute and Department of Biochemistry and Molecular Biology, Monash University, Clayton, Victoria, Australia
Yumeng Zhang, Jiangning Song, Monash AI Institute, Monash University, Melbourne, Victoria, Australia
Cesar de la Fuente-Nunez, Machine Biology Group, Departments of Psychiatry and Microbiology, Institute for Biomedical Informatics, Institute for Translational Medicine and Therapeutics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA
Cesar de la Fuente-Nunez, Departments of Bioengineering and Chemical and Biomolecular Engineering, School of Engineering and Applied Science, University of Pennsylvania, Philadelphia, PA, USA
Cesar de la Fuente-Nunez, Department of Chemistry, School of Arts and Sciences, University of Pennsylvania, Philadelphia, PA, USA
Cesar de la Fuente-Nunez, Penn Institute for Computational Science, University of Pennsylvania, Philadelphia, PA, USA
This article "Origins of chromosome instability unveiled by coupled imaging and genomics" is published in Nature.
Author: Marco Raffaele Cosenza
Journal: Nature
Year: 2025
Podcast type: Short
The authors are:
⦁ Marco Raffaele Cosenza
⦁ Alice Gaiatto
⦁ Büşra Erarslan Uysal
⦁ Álvaro Andrades
⦁ Nina Luisa Sautter
⦁ Marina Simunovic
⦁ Michael Adrian Jendrusch
⦁ Sonia Zumalave
⦁ Tobias Rausch
⦁ Aliaksandr Halavatyi
⦁ Eva-Maria Geissen
⦁ Joshua Lucas Eigenmann
⦁ Thomas Weber
⦁ Patrick Hasenfeld
⦁ Eva Benito
⦁ Catherine Stober
⦁ Isidro Cortes-Ciriano
⦁ Andreas E. Kulozik
⦁ Rainer Pepperkok
⦁ Jan O. Korbel
Affiliations:
Marco Raffaele Cosenza, Alice Gaiatto, Álvaro Andrades, Nina Luisa Sautter, Marina Simunovic, Michael Adrian Jendrusch, Tobias Rausch, Joshua Lucas Eigenmann, Thomas Weber, Patrick Hasenfeld, Eva Benito, Catherine Stober, Jan O. Korbel, Genome Biology Unit, European Molecular Biology Laboratory (EMBL), Heidelberg, Germany
Büşra Erarslan Uysal, Andreas E. Kulozik, Department of Pediatric Oncology, Hematology and Immunology, Heidelberg University Hospital, Heidelberg, Germany
Büşra Erarslan Uysal, Andreas E. Kulozik, Hopp Children’s Cancer Center Heidelberg (KiTZ), Heidelberg, Germany
Büşra Erarslan Uysal, Andreas E. Kulozik, Division of Pediatric Oncology, German Cancer Research Center (DKFZ), Heidelberg, Germany
Büşra Erarslan Uysal, Andreas E. Kulozik, Department of Pediatric Oncology, German Cancer Consortium (DKTK), Heidelberg, Germany
Büşra Erarslan Uysal, Andreas E. Kulozik, Heidelberg University, Heidelberg, Germany
Sonia Zumalave, Isidro Cortes-Ciriano, Cancer, Ageing and Somatic Mutation Programme, Wellcome Sanger Institute, Hinxton, UK
Tobias Rausch, Division of Theoretical Bioinformatics, German Cancer Research Center (DKFZ), Heidelberg, Germany
Aliaksandr Halavatyi, Rainer Pepperkok, Cell Biology and Biophysics Unit, European Molecular Biology Laboratory (EMBL), Heidelberg, Germany
Eva-Maria Geissen, Thomas Weber, Department of Cell Biology, Biocenter, University of Würzburg, Würzburg, Germany
Rainer Pepperkok, CECAD Cluster of Excellence in Aging Research, University of Cologne, Cologne, Germany
Isidro Cortes-Ciriano, Jan O. Korbel, European Molecular Biology Laboratory–European Bioinformatics Institute (EMBL–EBI), Hinxton, UK
Jan O. Korbel, German Cancer Research Center (DKFZ), Heidelberg, Germany
This article "Regulation of RNA-binding proteins by small biomolecules" is published in Nature Reviews Molecular Cell Biology.
Author: Weili Miao
Journal: Nature Reviews Molecular Cell Biology
Year: 2025
Podcast type: Short
The authors are:
⦁ Weili Miao
⦁ Douglas F. Porter
⦁ Vanessa Lopez-Pajares
⦁ Paul A. Khavari
Affiliations:
Weili Miao, Douglas F. Porter, Vanessa Lopez-Pajares, Paul A. Khavari, Program in Epithelial Biology, Stanford University School of Medicine, Stanford, CA, USA
Paul A. Khavari, Stanford Cancer Institute, Stanford, CA, USA
Paul A. Khavari, Veterans Affairs Palo Alto Healthcare System, Palo Alto, CA, USA
This article "Squidiff: predicting cellular development and responses to perturbations using a diffusion model" is published in Nature Methods.
Author: Siyu He
Journal: Nature Methods
Year: 2025
Podcast type: Short
The authors are:
Affiliations:
Siyu He, Yuefei Zhu, Daniel Naveed Tavakol, Yeh-Hsing Lao, Zixian Zhu, Cong Xu, Raju Tomer, Gordana Vunjak-Novakovic, Elham Azizi, Kam W. Leong, Department of Biomedical Engineering, Columbia University, New York, NY, USA
Siyu He, Elham Azizi, Irving Institute for Cancer Dynamics, Columbia University, New York, NY, USA
Siyu He, James Zou, Department of Biomedical Data Science, Stanford University, Stanford, CA, USA
Haotian Ye, James Zou, Department of Computer Sciences, Stanford University, Stanford, CA, USA
Yeh-Hsing Lao, Department of Pharmaceutical Sciences, University at Buffalo, Buffalo, NY, USA
Shradha Chauhan, Raju Tomer, Department of Biological Sciences, Columbia University, New York, NY, USA
Guy Garty, Center for Radiological Research, Columbia University, New York, NY, USA
Gordana Vunjak-Novakovic, Elham Azizi, Herbert Irving Comprehensive Cancer Center, Columbia University, New York, NY, USA
James Zou, Department of Electrical Engineering, Stanford University, Stanford, CA, USA
Elham Azizi, Department of Computer Sciences, Columbia University, New York, NY, USA
Elham Azizi, Data Science Institute, Columbia University, New York, NY, USA
Kam W. Leong, Department of Systems Biology, Columbia University Irving Medical Center, New York, NY, USA
Siyu He, Yuefei Zhu, Daniel Naveed Tavakol, These authors contributed equally.
This article "Epigenetically driven and early immune evasion in colorectal cancer evolution" is published in Nature Genetics.
Author: Eszter Lakatos
Journal: Nature Genetics
Year: 2025
Podcast type: Short
The authors are:
Affiliations:
Eszter Lakatos, Luis Zapata, Jacob Househam, Timon Heide, Nicholas Trahearn, Claire Lynn, Maximilian Mossner, Inmaculada Spiteri, George D. Cresswell, Ann-Marie Baker, Andrea Sottoriva, Trevor A. Graham, Evolutionary and Cancer Genomics Laboratory, The Institute of Cancer Research, London, UK
Vinaya Gunasri, Nicholas Trahearn, Marnix Jansen, Manuel Rodriguez-Justo, John Bridgewater, University College London, London, UK
Ottilie Swinyard, Chris Kimberley, Gerard Llibre-Palomar, Barts Cancer Institute, Queen Mary University of London, London, UK
Luis Cisneros, Carlo C. Maley, Arizona State University, Tempe, AZ, USA
Miriam Mitchison, University of Cambridge, Cambridge, UK
This article "RNA stability enhancers for durable base-modified mRNA therapeutics" is published in Nature Biotechnology.
Author: Soo-Jin Jung
Journal: Nature Biotechnology
Year: 2025
Podcast type: Short
The authors are:
Affiliations:
Soo-Jin Jung, Jenny J. Seo, Sunghan Lee, Seong-In Hyun, Ji-eun Lee, Sojeong Lee, Hyeshik Chang, Jin-Hong Kim, V. Narry Kim,
Center for RNA Research, Institute for Basic Science, Seoul, Republic of Korea; School of Biological Sciences, Seoul National University, Seoul, Republic of Korea
Yeji Lee, Hyukjin Lee, College of Pharmacy, Seoul National University, Seoul, Republic of Korea
Jenny J. Seo, Department of Microbiology, Harvard Medical School, Boston, MA, USA
This article "Insights into the relevance of targeting fibroblasts to control cancer" is published in Cell Reports Medicine.
Author: Viktoria Boeker
Journal: Cell Reports Medicine
Year: 2025
Podcast type: Short
The authors are:
Affiliations:
Viktoria Boeker, Raghu Kalluri, Department of Cancer Biology, University of Texas MD Anderson Cancer Center, Houston, TX, USA
Raghu Kalluri, Department of Bioengineering, Rice University, Houston, TX, USA ,Department of Electrical and Computer Engineering, Rice University, Houston, TX, USA, Department of Molecular and Cellular Biology, Baylor College of Medicine, Houston, TX, USA , Department of Pathology, University of Texas Medical Branch, Galveston, TX, USA
This article "PLAMseq enables the proteo-genomic characterization of chromatin-associated proteins and protein interactions in a single workflow" is published in Science Advances.
Author: Lourdes González-Vinceiro
Journal: Science Advances
Year: 2025
Podcast type: Short
The authors are:
Affiliations:
Lourdes González-Vinceiro, Carmen Espejo-Serrano, María Eugenia Soler-Oliva, Emily Soto-Hidalgo, María Luisa Mateos-Martín, Cristina González-Aguilera, Román González-Prieto, Andalusian Center for Molecular Biology and Regenerative Medicine (CABIMER), Seville, Spain
Daniel Rico, Román González-Prieto, Institute of Biomedicine of Seville (IBIS), Seville, Spain
Daniel Rico, Newcastle University, Newcastle upon Tyne, UK
This article "Genomic diversity of non-typhoidal Salmonella found in patients suffering from gastroenteritis in Norfolk, UK" is published in Microbial Genomics.
Author: Steven J. Rudder
Journal: Microbial Genomics
Year: 2025
Podcast type: Short
The authors are:
Affiliations:
Steven J. Rudder, Bilal Djeghout, Nicol Janecko, Gemma C. Langridge, Quadram Institute Bioscience, Rosalind Franklin Rd, Norwich Research Park, Norwich NR4 7UQ, UK
Steven J. Rudder, Bilal Djeghout, Nicol Janecko, Gemma C. Langridge, Centre for Microbial Interactions, Rosalind Franklin Rd, Norwich Research Park, Norwich NR4 7UQ, UK
Ngozi Elumogo, Eastern Pathology Alliance, Norfolk and Norwich University Hospital, Norwich NR4 7UY, UK
This article "Ancient origin of an urban underground mosquito" is published in Mosquito Genetics.
Author: Yuki Haba
Journal: Mosquito Genetics
Year: 2024
Podcast type: Short
The authors are:
Affiliations:
Yuki Haba, Noah H. Rose, Carolyn S. McBride, Department of Ecology and Evolutionary Biology, Princeton University, Princeton, NJ, USA
Petra Korlević, Mara K. N. Lawniczak, Wellcome Sanger Institute, Hinxton, UK
Erica McAlister, Natural History Museum, London, UK
Molly Schumer, Department of Biology, Stanford University, Stanford, CA, USA
This article “Global RNA recognition patterns of post-transcriptional regulators Hfq and CsrA revealed by UV crosslinking in vivo” is published in The EMBO Journal.
Author: Erik Holmqvist
Journal: The EMBO Journal
Year: 2016
Podcast type: Short
The authors are:
⦁ Erik Holmqvist
⦁ Patrick R. Wright
⦁ Lei Li
⦁ Thorsten Bischler
⦁ Lars Barquist
⦁ Richard Reinhardt
⦁ Rolf Backofen
⦁ Jörg Vogel
Affiliations:
Erik Holmqvist, Lei Li, Thorsten Bischler, Lars Barquist, Jörg Vogel, Institute for Molecular Infection Biology, University of Würzburg, Würzburg, Germany
Patrick R. Wright, Rolf Backofen, Bioinformatics Group, Department of Computer Science, Albert Ludwig University Freiburg, Freiburg, Germany
Rolf Backofen, BIOSS Centre for Biological Signaling Studies, University of Freiburg, Freiburg, Germany
Richard Reinhardt, Max Planck Genome Centre Cologne, Max Planck Institute for Plant Breeding Research, Cologne, Germany
This article “Resolving host–pathogen interactions by dual RNA-seq” is published in PLOS Pathogens.
Author: Alexander J. Westermann
Journal: PLOS Pathogens
Year: 2017
Podcast type: Short
The authors are:
⦁ Alexander J. Westermann
⦁ Lars Barquist
⦁ Jörg Vogel
Affiliations:
Alexander J. Westermann, Lars Barquist, Jörg Vogel, RNA Biology Group, Institute for Molecular Infection Biology, University of Würzburg, Würzburg, Germany
Jörg Vogel, Helmholtz Institute for RNA-based Infection Research (HIRI), Würzburg, Germany
This article “Dual RNA-seq unveils noncoding RNA functions in host–pathogen interactions” is published in Nature.
Author: Alexander J. Westermann
Journal: Nature
Year: 2016
Podcast type: Short
The authors are:
⦁ Alexander J. Westermann
⦁ Konrad U. Förstner
⦁ Fabian Amman
⦁ Lars Barquist
⦁ Yanjie Chao
⦁ Leon N. Schulte
⦁ Lydia Müller
⦁ Richard Reinhardt
⦁ Peter F. Stadler
⦁ Jörg Vogel
Affiliations:
Alexander J. Westermann, Konrad U. Förstner, Lars Barquist, Yanjie Chao, Leon N. Schulte, Jörg Vogel, University of Würzburg, RNA Biology Group, Institute for Molecular Infection Biology, Josef-Schneider-Straße 2/D15, D-97080 Würzburg, Germany
Konrad U. Förstner, University of Würzburg, Core Unit Systems Medicine, Josef-Schneider-Straße 2/D15, D-97080 Würzburg, Germany
Fabian Amman, Lydia Müller, Peter F. Stadler, University of Leipzig, Department of Computer Science and Interdisciplinary Center for Bioinformatics, Härtelstraße 16–18, D-04107 Leipzig, Germany
Fabian Amman, Peter F. Stadler, University of Vienna, Theoretical Biochemistry Group, Institute for Theoretical Chemistry, Währinger Straße 17, A-1090 Vienna, Austria
Richard Reinhardt, Max Planck Genome Centre Cologne, Max Planck Institute for Plant Breeding Research, Carl-von-Linné-Weg 10, D-50829 Cologne, Germany
Peter F. Stadler, Max Planck Institute for Mathematics in the Sciences, Inselstraße 22, D-04103 Leipzig, Germany
Peter F. Stadler, Santa Fe Institute, 1399 Hyde Park Rd, Santa Fe, New Mexico 87501, USA
Jörg Vogel, Research Centre for Infectious Diseases (ZINF), University of Würzburg, D-97070 Würzburg, Germany